PPDB

PPDB	The Plant Proteome Database

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AT1G08470.1 strictosidine synthase-like 3

Lab Annot.

Mapman: 16.4.1 secondary metabolism.N misc.alkaloid-like

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G22020.1 11 Arabidopsis thaliana 0 374 66 82 0 (0) S
AT5G22020.3 11 Arabidopsis thaliana 0 374 66 82 0 (0) S
AT5G22020.2 11 Arabidopsis thaliana 0 374 66 82 0 (0) S
Os03g53950.1 7 Oryza sativa 3E-167 373 61 77 20 (20) M
Os03g15710.1 7 Oryza sativa 2E-88 381 39 58 0 (0) M
Os11g04660.1 7 Oryza sativa 1E-82 337 41 61 0 (0) S
v1_GRMZM2G177928_P01 4a53 Zea mays 0 376 63 79 3 (2) S
GRMZM2G177928_P01 3.21 Zea mays 0 376 63 79 6 (6) S
Zm00001eb057400_P001 agpv5 Zea mays 0 376 63 79 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	NHL(5) Reg_prop(3) SGL(2) Str_synth(2)
TargetP:	Secreted (Class 1 C0.027; M0.012; S0.933; _0.118)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	390 aa (-cTP 347)
Molecular Weight	44.04 kDA(-cTP )
PI	8.11(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
17151019(vacuole - suspension cell)
19200160(flower-stage 12)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21988472(vacuole (unfiltered data))
21472856(mitochondria-LC-MS/MS-uncurated)

Comparative Proteomics Data