PPDB

 The Plant Proteome Database

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AT1G08460.1   histone deacetylase 8
Lab Annot. histone deacetylase 8
Mapman: 27.3.55 RNA.regulation of transcription.HDA
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G08460.2 11Arabidopsis thaliana02771001000 (0)_
AT5G61060.1 11Arabidopsis thaliana9E-4238628470 (0)_
AT5G61060.2 11Arabidopsis thaliana2E-4138627470 (0)_
Os05g36920.1 7Oryza sativa037169840 (0)S
Os05g36930.2 7Oryza sativa5E-15129269840 (0)_
Os05g36930.1 7Oryza sativa2E-15029269840 (0)M
GRMZM2G046824_P03 3.21Zea mays037268830 (0)_
Zm00001eb348390_P002 agpv5Zea mays037268830 (0)_
v1_GRMZM2G046824_P03 4a53Zea mays037268830 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Hist_deacetyl(1)
TargetP: Cytoplasm (Class 2 C0.037; M0.090; S0.075; _0.887)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 377 aa (-cTP 361)
Molecular Weight 41.26 kDA(-cTP )
PI 5.43(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help