PPDB

The Plant Proteome Database

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AT1G08370.1   decapping 1

Lab Annot. decapping 1
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os11g05650.1 7Oryza sativa3E-12337260736 (6)C
Os12g06020.1 7Oryza sativa3E-10937554684 (4)_
Os07g14580.1 7Oryza sativa8E-10439147626 (6)_
Zm00001eb197150_P001 agpv5Zea mays7E-12337258730 (0)_
GRMZM2G011173_P01 3.21Zea mays7E-12337258734 (4)_
GRMZM2G011173_P02 3.21Zea mays7E-12337258734 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DCP1(2)
TargetP: Cytoplasm (Class 3 C0.068; M0.213; S0.068; _0.777)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 367 aa (-cTP 308)
Molecular Weight 40.61 kDA(-cTP )
PI 5.43(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help