PPDB

The Plant Proteome Database

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AT1G08160.1   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G22870.1 11Arabidopsis thaliana7E-4018938600 (0)_
AT3G11650.1 11Arabidopsis thaliana2E-1720127470 (0)_
AT4G26490.1 11Arabidopsis thaliana5E-1214327520 (0)C
Os02g44670.1 7Oryza sativa3E-1516028510 (0)M
Os04g58850.1 7Oryza sativa4E-13180224428 (28)S
Os10g39970.1 7Oryza sativa1E-0920723420 (0)M
Zm00001eb022900_P001 agpv5Zea mays7E-2619133560 (0)M
GRMZM2G106792_P01 3.21Zea mays2E-1318523467 (7)C
v1_GRMZM2G106792_P01 4a53Zea mays2E-1318523466 (6)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2140(2) LEA_2(2)
TargetP: Cytoplasm (Class 4 C0.239; M0.226; S0.016; _0.484)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 221 aa (-cTP 196)
Molecular Weight 25.16 kDA(-cTP )
PI 10.64(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help