PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

OTP82 - PPR protein - editing ndhG, ndhB
Mapman: 27.1.5* RNA.processing.editing

Curated Location

plastid (Pubmed: 23198870 19934379 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G08070.2 11 Arabidopsis thaliana 0 637 100 100 0 (0) S
AT2G29760.1 11 Arabidopsis thaliana 0 774 39 58 1 (0) C
AT3G12770.1 11 Arabidopsis thaliana 4E-178 704 37 58 0 (0) _
Os04g14130.3 7 Oryza sativa 0 669 41 61 0 (0) _
Os04g14130.2 7 Oryza sativa 0 669 41 61 0 (0) _
Os04g14130.1 7 Oryza sativa 0 669 41 61 0 (0) _
GRMZM2G481373_P01 3.21 Zea mays 0 738 41 60 0 (0) C
v1_GRMZM2G481373_P01 4a53 Zea mays 0 738 41 60 0 (0) C
Zm00001eb424980_P001 agpv5 Zea mays 0 738 41 60 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Clathrin(4) DUF4817(1) DYW_deaminase(1) PPR(13) PPR_1(9) PPR_2(9) PPR_3(10) PPR_
TargetP:	Chloroplast (Class 5 C0.398; M0.097; S0.031; _0.275)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	741 aa (-cTP 737)
Molecular Weight	83.51 kDA(-cTP 83.05)
PI	6.62(-cTP 6.63)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data