PPDB

PPDB	The Plant Proteome Database

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AT1G08050.1 Zinc finger (C3HC4-type RING finger) family protein

Lab Annot.

Zinc finger (C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G60710.1 11 Arabidopsis thaliana 0 684 51 65 0 (0) M
AT2G38970.1 11 Arabidopsis thaliana 0 679 49 65 2 (2) M
AT3G54780.1 11 Arabidopsis thaliana 0 665 47 64 0 (0) _
Os02g56280.1 7 Oryza sativa 0 726 45 59 0 (0) _
Os02g40664.1 7 Oryza sativa 2E-180 644 47 62 0 (0) M
Os04g42980.1 7 Oryza sativa 4E-180 610 46 62 0 (0) _
Zm00001eb258330_P003 agpv5 Zea mays 0 623 48 63 0 (0) _
GRMZM2G178038_P02 3.21 Zea mays 0 623 48 63 0 (0) _
Zm00001eb258330_P002 agpv5 Zea mays 0 728 45 60 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PHD(1) VWA(1) VWA_2(1) VWA_3(1) VWA_CoxE(1) Vwaint(1) zf-ANAPC11(1) zf-C3H2C3(1)
TargetP:	Chloroplast (Class 2 C0.894; M0.034; S0.006; _0.279)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	641 aa (-cTP 578)
Molecular Weight	70.12 kDA(-cTP 63.44)
PI	5.84(-cTP 5.78)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2300	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data