PPDB

PPDB	The Plant Proteome Database

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AT1G07980.1 nuclear factor Y%2C subunit C10

Lab Annot.

Mapman: 27.3.16 RNA.regulation of transcription.CCAAT box binding factor family, HAP5

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G07980.2 11 Arabidopsis thaliana 2E-117 171 98 98 0 (0) C
AT5G19490.1 11 Arabidopsis thaliana 6E-08 79 30 53 0 (0) _
AT5G43250.1 11 Arabidopsis thaliana 3E-06 91 28 58 0 (0) _
Os03g63530.2 7 Oryza sativa 9E-26 87 50 81 0 (0) C
Os03g63530.1 7 Oryza sativa 9E-26 87 50 81 0 (0) C
Os05g41450.1 7 Oryza sativa 2E-07 77 32 53 0 (0) _
GRMZM2G083964_P01 3.21 Zea mays 4E-19 86 44 74 0 (0) C
GRMZM2G083964_P02 3.21 Zea mays 4E-19 86 44 74 0 (0) C
Zm00001eb064730_P005 agpv5 Zea mays 4E-19 86 44 74 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBFD_NFYB_HMF(1) CENP-W(2) CNDH2_M(1) Histone(2)
TargetP:	Chloroplast (Class 3 C0.836; M0.059; S0.021; _0.287)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	206 aa (-cTP 153)
Molecular Weight	23.03 kDA(-cTP 17.14)
PI	9.57(-cTP 5.57)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data