PPDB

 The Plant Proteome Database

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AT1G07960.1   PDI-like 5-1
Lab Annot.
Mapman: 21.1 redox.thioredoxin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07960.4 11Arabidopsis thaliana3E-1041461001000 (0)S
AT1G07960.2 11Arabidopsis thaliana3E-1041461001002 (2)S
AT1G07960.3 11Arabidopsis thaliana3E-1041461001002 (2)S
Os03g17860.1 7Oryza sativa4E-6311977864 (4)S
Os03g17860.2 7Oryza sativa2E-539480884 (4)S
Os05g06430.2 7Oryza sativa3E-17108375531 (31)S
Zm00001eb013190_P001 agpv5Zea mays1E-6211877850 (0)M
GRMZM2G073628_P01 3.21Zea mays2E-5312663734 (4)M
v1_GRMZM2G073628_P01 4a53Zea mays2E-5312663733 (3)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: OST3_OST6(1) Thioredoxin(1) Thioredoxin_2(1)
TargetP: Secreted (Class 1 C0.006; M0.021; S0.994; _0.051)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 146 aa (-cTP 122)
Molecular Weight 16.57 kDA(-cTP )
PI 4.98(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help