PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G07950.1   Surfeit locus protein 5 subunit 22 of Mediator complex

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07950.2 11Arabidopsis thaliana7E-1111541001000 (0)M
AT1G16430.1 11Arabidopsis thaliana1E-7614093970 (0)M
Os08g37480.2 7Oryza sativa2E-52128598016 (16)M
Os08g37480.1 7Oryza sativa2E-52128598016 (16)M
Os01g04110.1 7Oryza sativa6E-5112857790 (0)C
Zm00001eb335330_P001 agpv5Zea mays3E-5513265870 (0)C
GRMZM2G153766_P01 3.21Zea mays9E-5512463864 (3)C
v1_GRMZM2G153766_P01 4a53Zea mays9E-5512463864 (4)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DotU(1) Med22(1) RhoGEF(1)
TargetP: Cytoplasm (Class 5 C0.181; M0.374; S0.049; _0.403)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 154 aa (-cTP 102)
Molecular Weight 16.56 kDA(-cTP )
PI 5.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help