PPDB

The Plant Proteome Database

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AT1G07910.1   RNAligase

Lab Annot. RNAligase
Mapman: 29.2.4 protein.synthesis.elongation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07910.2 11Arabidopsis thaliana011041001003 (1)C
Os07g09400.1 7Oryza sativa0102467790 (0)C
Zm00001eb302520_P001 agpv5Zea mays0106365780 (0)M
v1_GRMZM2G438239_P01 4a53Zea mays1E-16039758740 (0)_
GRMZM2G438239_P01 3.21Zea mays1E-16039758740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: tRNA_lig_CPD(2)
TargetP: Chloroplast (Class 5 C0.641; M0.015; S0.026; _0.621)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1104 aa (-cTP 1038)
Molecular Weight 123.20 kDA(-cTP 116.34)
PI 8.16(-cTP 8.30)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help