PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G07850.1   transferring glycosyl group transferase (DUF604)

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G23490.1 11Arabidopsis thaliana041962780 (0)_
AT4G11350.1 11Arabidopsis thaliana042260770 (0)_
AT5G41460.1 11Arabidopsis thaliana041761760 (0)_
Os04g48950.1 7Oryza sativa043361730 (0)M
Os10g39020.2 7Oryza sativa1E-17042458750 (0)_
Os10g39020.1 7Oryza sativa1E-17042458750 (0)_
GRMZM2G426067_P01 3.21Zea mays050154690 (0)S
GRMZM2G098676_P01 3.21Zea mays050155690 (0)S
Zm00001eb428460_P001 agpv5Zea mays050155690 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF604(1) Fringe(1)
TargetP: Chloroplast (Class 3 C0.762; M0.031; S0.008; _0.233)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 541 aa (-cTP 504) (-lTP 421)
Molecular Weight 62.11 kDA(-cTP 57.99)(-lTP 48.61)
PI 9.60(-cTP 9.57)(-lTP 9.725)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help