PPDB

The Plant Proteome Database

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AT1G07830.1   ribosomal protein L29 family protein

Lab Annot. ribosomal protein L29 protein
Mapman: 29.2.1.1.2.2.29 protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L29
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os06g03790.1 7Oryza sativa1E-6314370830 (0)M
GRMZM2G048557_P02 3.21Zea mays1E-62143677919 (19)M
GRMZM2G048557_P01 3.21Zea mays1E-62143677919 (19)M
Zm00001eb378540_P003 agpv5Zea mays1E-6214367790 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MRP-L47(1) Ribosomal_L29(1)
TargetP: Mitochondria (Class 1 C0.009; M0.960; S0.084; _0.048)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 144 aa (-cTP 121)
Molecular Weight 16.89 kDA(-cTP )
PI 10.06(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1613Detail       Natural Senescence leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

18931141(peroxisomes- high&low purity (cell culture))
19525416(leaf (wt and clpr4-1 mutant))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help