PPDB

The Plant Proteome Database

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AT1G07750.1   RmlC-like cupins superfamily protein

Lab Annot. cupin protein
Mapman: 33.1 development.storage proteins
Curated Location not plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G28680.1 11Arabidopsis thaliana035689940 (0)_
AT1G03880.1 11Arabidopsis thaliana2E-30397234270 (45)S
AT1G03890.1 11Arabidopsis thaliana5E-29407244228 (16)S
Os05g02520.1 7Oryza sativa0356698030 (30)_
Os01g74480.1 7Oryza sativa1E-17735967780 (0)_
Os05g02520.2 7Oryza sativa4E-14429269790 (0)_
Zm00001eb132730_P001 agpv5Zea mays036068790 (0)_
GRMZM2G054852_P01 3.21Zea mays036068795 (5)_
v1_GRMZM2G054852_P01 4a53Zea mays036068795 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ARD(2) Cupin_1(2) Cupin_2(2) Cupin_3(2)
TargetP: Cytoplasm (Class 2 C0.209; M0.061; S0.042; _0.923)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 356 aa (-cTP 292)
Molecular Weight 38.31 kDA(-cTP )
PI 5.83(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

16242667(mature Pollen)
16358359(cell suspension (M&Skoog))
16247729(mature Pollen)
16055689(Glutathionylated suspension cell)
15815986(Silique)
18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
20118269(developing seeds)
19525416(leaf (wt and clpr4-1 mutant))
20018591(strong Cu2+ binding (mitochondria - cell culture))
20018591(Zn2+ binding (mitochondria - cell culture))
20166762(guard cells (Arabidopsis))
19508356(mature pollen grains and pollen tubes)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
22430844(Golgi-cell-culture)
21472856(mitochondrial-2DEgels-uncurated)

Comparative Proteomics Data


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