PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G07705.1   NOT2 / NOT3 / NOT5 family

Lab Annot. transcription regulator
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07705.2 11Arabidopsis thaliana05461001001 (1)C
AT5G59710.1 11Arabidopsis thaliana058361733 (1)C
AT5G59710.2 11Arabidopsis thaliana058361730 (0)C
Os03g52594.4 7Oryza sativa2E-18057054690 (0)C
Os03g52594.3 6Oryza sativa2E-18057054690 (0)C
Os03g52594.1 6Oryza sativa2E-18057054690 (0)C
Zm00001eb291100_P007 agpv5Zea mays8E-17055252680 (0)C
GRMZM2G010357_P01 3.21Zea mays1E-16559049649 (1)C
GRMZM2G010357_P05 3.21Zea mays1E-16559049649 (1)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NOT2_3_5(2)
TargetP: Chloroplast (Class 3 C0.825; M0.027; S0.003; _0.256)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 546 aa (-cTP 520)
Molecular Weight 57.41 kDA(-cTP 54.80)
PI 7.04(-cTP 7.03)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help