PPDB

The Plant Proteome Database

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AT1G07670.1   endomembrane-type CA-ATPase 4

Lab Annot. endomembrane-type CA-ATPase 4
Mapman: 34.21 transport.calcium
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07670.2 11Arabidopsis thaliana010611001000 (0)_
AT1G07810.1 11Arabidopsis thaliana0106197988 (8)_
AT4G00900.2 11Arabidopsis thaliana0103865790 (0)_
Os03g17310.1 7Oryza sativa01067768750 (50)_
Os05g02940.1 7Oryza sativa037584930 (0)M
Os03g52090.1 7Oryza sativa092544580 (0)_
Zm00001eb397320_P001 agpv5Zea mays0106677870 (0)_
GRMZM2G162426_P01 3.21Zea mays01066778732 (32)_
Zm00001eb012860_P001 agpv5Zea mays0106577870 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cation_ATPase(1) Cation_ATPase_C(1) Cation_ATPase_N(1) E1-E2_ATPase(2) HAD(1) Hy
TargetP: Cytoplasm (Class 2 C0.146; M0.100; S0.113; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction: 8 TMs
Aramemnon: 6 TMs
TAT position:
Length 1061 aa (-cTP 1041)
Molecular Weight 116.18 kDA(-cTP )
PI 5.09(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
337Detail       bundle sheaths [A. thaliana]Bundle sheath total BS strands wild-type
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
2246Detail       seedlings [A. thaliana] total tissue gfs9
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (Gamborg))
16618929(ER-LOPIT-callus)
17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
21325567(root-proteome (wt & det3))
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help