PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G07645.1   dessication-induced 1VOC superfamily protein
Lab Annot. dessication-induced 1VOC protein (DSI-1VOC)
Mapman: 24.2 Biodegradation of Xenobiotics.lactoylglutathione lyase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g16940.1 7Oryza sativa2E-6813074830 (0)C
Zm00001eb012550_P001 agpv5Zea mays2E-5913862760 (0)S
Zm00001eb012550_P002 agpv5Zea mays2E-5913862760 (0)S
v1_GRMZM2G172574_P01 4a53Zea mays2E-5913862766 (6)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyoxalase(1) Glyoxalase_2(1) Glyoxalase_4(1) Glyoxalase_6(1)
TargetP: Secreted (Class 3 C0.020; M0.184; S0.595; _0.178)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 137 aa (-cTP 119)
Molecular Weight 15.39 kDA(-cTP )
PI 6.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2301Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help