PPDB

 The Plant Proteome Database

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AT1G07440.1   NAD(P)-binding Rossmann-fold superfamily protein
Lab Annot. short-chain dehydrogenase/reductase (SDR) protein
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G29340.2 11Arabidopsis thaliana1E-1392597285118 (76)_
AT2G29340.1 11Arabidopsis thaliana3E-1392597285118 (76)_
AT2G29330.1 11Arabidopsis thaliana2E-13425872820 (0)_
Os03g16220.1 7Oryza sativa3E-11825461800 (0)M
Os03g16210.1 7Oryza sativa6E-11526760740 (0)C
Os03g16230.2 7Oryza sativa1E-11025361790 (0)M
GRMZM2G141799_P01 3.21Zea mays2E-115260607753 (53)_
Zm00001eb012060_P001 agpv5Zea mays2E-11526060770 (0)_
Zm00001eb165790_P001 agpv5Zea mays4E-9726056720 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: adh_short(1) adh_short_C2(1) KR(1)
TargetP: Cytoplasm (Class 5 C0.019; M0.491; S0.086; _0.535)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 266 aa (-cTP 261)
Molecular Weight 28.33 kDA(-cTP )
PI 6.52(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

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