PPDB

 The Plant Proteome Database

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AT1G07410.1   RAB GTPase homolog A2B
Lab Annot. Ras-related GTP-binding protein, putative
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59150.1 11Arabidopsis thaliana4E-134217839243 (34)_
AT3G46830.1 11Arabidopsis thaliana1E-133217849055 (49)_
AT3G46830.2 11Arabidopsis thaliana1E-13321784900 (0)_
Os03g60870.1 7Oryza sativa1E-136215849320 (20)_
Os01g62950.1 7Oryza sativa2E-12721679897 (7)_
Os05g20050.1 7Oryza sativa6E-11421671860 (0)_
Zm00001eb062910_P001 agpv5Zea mays6E-14021586950 (0)_
GRMZM2G473906_P05 3.21Zea mays6E-140215869528 (26)_
GRMZM2G473906_P04 3.21Zea mays6E-140215869528 (26)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_14(1) AAA_16(1) AAA_22(1) AAA_24(2) ABC_tran(1) Arf(1) FeoB_N(1) GTP_EFTU(1)
TargetP: Cytoplasm (Class 4 C0.106; M0.062; S0.396; _0.746)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 214 aa (-cTP 157)
Molecular Weight 23.69 kDA(-cTP )
PI 6.44(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
1596Detail        [A. thaliana]  
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
2268Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
20061580(chloroplast envelope (inner+outer))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data

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