PPDB

The Plant Proteome Database

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AT1G07360.1   CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein

Lab Annot.
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G29580.1 11Arabidopsis thaliana049580860 (0)_
AT5G07060.2 11Arabidopsis thaliana7E-17239266740 (0)_
AT5G07060.1 11Arabidopsis thaliana2E-16938764730 (0)_
Os06g07350.1 7Oryza sativa038777862 (2)_
Os07g18050.1 7Oryza sativa038775862 (2)_
Os09g28810.1 7Oryza sativa1E-119439566 (6)_
Zm00001eb375430_P003 agpv5Zea mays041471820 (0)_
Zm00001eb375430_P002 agpv5Zea mays041471820 (0)_
GRMZM5G831993_P02 3.21Zea mays041471820 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1) RRM_3(1) RRM_occluded(1) Torus(1) zf-CCCH(1) zf-CCCH_2(1) zf-CCCH_3(1)
TargetP: Cytoplasm (Class 2 C0.069; M0.275; S0.050; _0.899)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 481 aa (-cTP 408)
Molecular Weight 53.59 kDA(-cTP )
PI 7.21(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
755Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)

Comparative Proteomics Data


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