PPDB

The Plant Proteome Database

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AT1G07310.1   Calcium-dependent lipid-binding (CaLB domain) family protein

Lab Annot. Calcium-dependent lipid-binding (CaLB domain)
Mapman: 35.1.19 not assigned.no ontology.C2 domain-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G23950.1 11Arabidopsis thaliana4E-2113836570 (0)_
AT5G23950.2 11Arabidopsis thaliana1E-2013836570 (0)_
AT4G01200.1 11Arabidopsis thaliana3E-0713226510 (0)_
Os01g63470.1 7Oryza sativa7E-3314452650 (0)C
Os08g44850.1 7Oryza sativa4E-32159436310 (10)_
Os09g39770.1 7Oryza sativa1E-3015740630 (0)_
GRMZM2G090177_P01 3.21Zea mays6E-30150416411 (11)_
v1_GRMZM2G090177_P01 4a53Zea mays6E-30150416412 (12)_
Zm00001eb038880_P002 agpv5Zea mays6E-3015041640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: C2(1) Toprim_3(1)
TargetP: Cytoplasm (Class 2 C0.087; M0.076; S0.045; _0.852)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 352 aa (-cTP 285)
Molecular Weight 39.01 kDA(-cTP )
PI 7.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1907Detail       leaf [A. thaliana] total leaf tissue Col_0
1911Detail       leaf [A. thaliana] total leaf tissue Col_0

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help