PPDB

The Plant Proteome Database

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AT1G07210.1   Ribosomal protein S18

Lab Annot.
Mapman: 29.2.1.1.3.1.18 protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S18
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os10g35690.1 7Oryza sativa1E-3615749640 (0)M
v1_GRMZM2G135095_P02 4a53Zea mays6E-3921944543 (3)_
Zm00001eb142300_P004 agpv5Zea mays6E-3921944540 (0)_
GRMZM2G135095_P02 3.21Zea mays6E-3921944542 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ribosomal_S18(1)
TargetP: Mitochondria (Class 3 C0.312; M0.836; S0.030; _0.009)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 261 aa (-cTP 230)
Molecular Weight 29.62 kDA(-cTP )
PI 5.33(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help