PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G07070.1   Ribosomal protein L35Ae family protein

Lab Annot. 60S ribosomal protein L35a (RPL35aA)
Mapman: 29.2.1.2.2.535 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35A
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G74270.1 11Arabidopsis thaliana4E-77112979921 (18)M
AT3G55750.1 11Arabidopsis thaliana4E-74111929921 (18)M
AT1G41880.1 11Arabidopsis thaliana6E-74111919969 (40)M
Os02g54470.1 7Oryza sativa2E-66112849129 (29)M
Os02g54470.2 7Oryza sativa2E-66112849129 (29)M
Os05g48310.1 7Oryza sativa2E-64111829026 (26)M
Zm00001eb192860_P001 agpv5Zea mays3E-6611283910 (0)M
v1_GRMZM2G181336_P02 4a53Zea mays3E-66112839169 (68)M
v1_GRMZM2G181336_P01 4a53Zea mays3E-66112839169 (68)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2080(2) Ribosomal_L35Ae(1) RimM(2)
TargetP: Mitochondria (Class 3 C0.024; M0.830; S0.020; _0.237)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 112 aa (-cTP 97)
Molecular Weight 12.85 kDA(-cTP )
PI 10.68(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17934214(cytosolic ribosome)
19546170(mature pollen grains)
17216043(leaf)
19334764(plasma membrane (cell culture))
19888209(80S polysomal fraction)
19888209(leaves)
19329564(peroxisomes (leaf))
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21841088(mitochondria (2DE native gel))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help