PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G06840.1   Leucine-rich repeat protein kinase family protein

Lab Annot. leucine-rich repeat transmembrane protein kinase, putative
Mapman: 30.2.8.1 signalling.receptor kinases.leucine rich repeat VIII-1; 29.4.1 protein.postranslational modification.kinase
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G01950.8 11Arabidopsis thaliana089558710 (0)S
AT5G01950.3 11Arabidopsis thaliana089558710 (0)S
AT5G01950.1 11Arabidopsis thaliana0895587113 (13)S
Os01g72990.2 7Oryza sativa096561750 (0)S
Os01g72990.1 7Oryza sativa096561750 (0)S
Os05g40270.4 7Oryza sativa094757710 (0)S
Zm00001eb089740_P003 agpv5Zea mays095360750 (0)S
Zm00001eb149670_P001 agpv5Zea mays094956720 (0)S
GRMZM2G038165_P01 3.21Zea mays094956720 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APH(1) Fe_dep_repress(1) LRR_4(7) LRR_8(5) LRR_9(3) LRRNT_2(1) PK_Tyr_Ser-Thr(1)
TargetP: Secreted (Class 1 C0.006; M0.020; S0.983; _0.026)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 953 aa (-cTP 930)
Molecular Weight 105.62 kDA(-cTP )
PI 6.40(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
17432890(leaf total membranes)
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help