PPDB

 The Plant Proteome Database

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AT1G06760.1   winged-helix DNA-binding transcription factor family protein
Lab Annot. winged-helix DNA-binding transcription factor
Mapman: 28.1.3 DNA.synthesis/chromatin structure.histone
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G30620.1 11Arabidopsis thaliana1E-54284586430 (19)_
AT2G30620.2 11Arabidopsis thaliana2E-51190626729 (18)_
AT2G18050.1 11Arabidopsis thaliana6E-198458720 (0)_
Os03g58470.1 7Oryza sativa6E-2473648017 (17)_
Os04g18090.1 7Oryza sativa3E-207357720 (0)C
Os07g08710.1 7Oryza sativa9E-207561685 (5)_
Zm00001eb212840_P002 agpv5Zea mays1E-247564780 (0)_
Zm00001eb212840_P003 agpv5Zea mays3E-247265790 (0)_
GRMZM2G003002_P02 3.21Zea mays3E-2472657910 (10)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Linker_histone(3)
TargetP: Cytoplasm (Class 2 C0.216; M0.070; S0.088; _0.865)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 274 aa (-cTP 224)
Molecular Weight 28.95 kDA(-cTP )
PI 10.77(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2248Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help