PPDB

 The Plant Proteome Database

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AT1G06730.1   pfkB-like carbohydrate kinase family protein
Lab Annot. pfkB type carbohydrate kinase
Mapman: 3.5 minor CHO metabolism.others
Curated Location plastid (Pubmed: 23198870 )

TAIR curated location: nucleus & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G59480.1 11Arabidopsis thaliana5E-1230225411 (1)_
AT1G66430.1 11Arabidopsis thaliana6E-113832339276 (204)C
AT2G31390.1 11Arabidopsis thaliana1E-102892540106 (54)_
Os03g06880.1 7Oryza sativa3E-17039360752 (2)C
Os01g66940.1 7Oryza sativa1E-11300244554 (54)S
Os06g12600.1 7Oryza sativa1E-10307263732 (32)C
v1_GRMZM2G169320_P01 4a53Zea mays7E-16939759754 (4)C
GRMZM2G169320_P01 3.21Zea mays7E-16939759755 (5)C
Zm00001eb004990_P003 agpv5Zea mays7E-16939759750 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4224(2) PfkB(1) Phos_pyr_kin(2)
TargetP: Chloroplast (Class 2 C0.663; M0.035; S0.053; _0.035)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 488 aa (-cTP 437)
Molecular Weight 52.76 kDA(-cTP 46.97)
PI 5.89(-cTP 5.23)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2290Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help