PPDB

PPDB	The Plant Proteome Database

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AT1G06670.1 nuclear DEIH-boxhelicase

Lab Annot.

NIH (NUCLEAR DEIH-BOXHELICASE)
Mapman: 28.99 DNA.unspecified

Curated Location

TAIR curated location: nucleus10471743

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G06670.2 11 Arabidopsis thaliana 0 1576 97 97 0 (0) _
AT2G30800.1 11 Arabidopsis thaliana 0 1379 60 71 2 (2) _
AT2G30800.2 11 Arabidopsis thaliana 0 1018 59 70 0 (0) _
Os01g56190.1 7 Oryza sativa 0 1124 53 70 0 (0) _
Os10g33275.2 7 Oryza sativa 4E-92 497 37 57 2 (2) _
Os10g33275.1 7 Oryza sativa 1E-90 497 37 57 2 (2) M
GRMZM2G468132_P01 3.21 Zea mays 0 922 54 72 3 (2) C
Zm00001eb370170_P001 agpv5 Zea mays 0 1124 53 71 0 (0) M
Zm00001eb370170_P007 agpv5 Zea mays 0 1118 51 68 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_19(1) AAA_22(1) AAA_7(1) Ank_2(1) Ank_5(1) ATPase(1) DEAD(1) HA2(1) Helicase
TargetP:	Cytoplasm (Class 2 C0.102; M0.124; S0.050; _0.823)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1576 aa (-cTP 1521)
Molecular Weight	174.51 kDA(-cTP )
PI	6.37(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data