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AT1G06550.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein

Lab Annot.

ATP-dependent caseinolytic (Clp) protease/crotonase protein
Mapman: 11.9.4.3 lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase; 13.2.6.3 amino acid metabolism.degradation.aromatic aa.tryptophan

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G65940.1 11 Arabidopsis thaliana 2E-102 356 42 63 17 (6) _
AT5G65940.4 11 Arabidopsis thaliana 2E-102 356 42 63 0 (0) _
AT2G30650.1 11 Arabidopsis thaliana 1E-99 352 43 64 2 (1) _
Os01g54860.1 7 Oryza sativa 0 376 65 81 16 (16) _
Os12g16350.11 7 Oryza sativa 2E-98 357 42 61 18 (18) M
Os12g16350.4 7 Oryza sativa 2E-98 357 42 61 18 (18) M
GRMZM5G854571_P01 3.21 Zea mays 0 383 73 86 0 (0) _
Zm00001eb153460_P001 agpv5 Zea mays 0 382 66 81 0 (0) _
GRMZM2G042818_P01 3.21 Zea mays 0 382 66 81 20 (13) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ECH_1(1) ECH_2(1)
TargetP:	Cytoplasm (Class 2 C0.174; M0.059; S0.151; _0.926)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	387 aa (-cTP 374)
Molecular Weight	43.26 kDA(-cTP )
PI	5.39(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data