PPDB

The Plant Proteome Database

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AT1G06490.1   glucan synthase-like 7

Lab Annot. 1,3-beta-glucan synthase/ transferase (GSLO7)
Mapman: 3.6 minor CHO metabolism.callose
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G06490.2 11Arabidopsis thaliana019331001000 (0)C
AT3G59100.1 11Arabidopsis thaliana0191575870 (0)C
AT3G59100.2 11Arabidopsis thaliana0162976880 (0)_
Os03g03610.1 7Oryza sativa0197354710 (0)M
Os03g03610.3 7Oryza sativa0197354710 (0)M
Os03g03610.2 7Oryza sativa0197354710 (0)M
Zm00001eb163000_P002 agpv5Zea mays0194961760 (0)C
Zm00001eb163000_P001 agpv5Zea mays0195261760 (0)C
v1_GRMZM2G430680_P02 4a53Zea mays0195656727 (7)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FKS1_dom1(2) Glucan_synthase(2) Vta1(1)
TargetP: Chloroplast (Class 5 C0.510; M0.177; S0.085; _0.346)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 14 TMs
Aramemnon: 16 TMs
TAT position:
Length 1958 aa (-cTP 1936)
Molecular Weight 228.03 kDA(-cTP 225.75)
PI 8.50(-cTP 8.45)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1614Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
1675Detail       Rosettes [A. thaliana]  
1694Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1696Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek1k3
1710Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1713Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek1k3
1928Detail       Rosettes [A. thaliana] Thylakoids wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


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