PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G06210.1   ENTH/VHS/GAT family protein

Lab Annot. VHS domain-containing protein / GAT domain-containing protein
Mapman: 31.4 cell.vesicle transport
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G06210.2 11Arabidopsis thaliana026298980 (0)_
AT5G16880.1 11Arabidopsis thaliana1E-72315416145 (14)_
AT5G16880.2 11Arabidopsis thaliana1E-72315416145 (14)_
Os10g42724.1 7Oryza sativa4E-7031341590 (0)_
Os02g46962.2 7Oryza sativa5E-6632940588 (8)_
Os02g46962.1 7Oryza sativa5E-6632940588 (8)_
Zm00001eb187900_P004 agpv5Zea mays5E-6832839580 (0)_
Zm00001eb187900_P001 agpv5Zea mays5E-6832839580 (0)_
Zm00001eb187900_P003 agpv5Zea mays5E-6832839580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3361(2) GAT(1) VHS(1) YqfQ(1)
TargetP: Cytoplasm (Class 2 C0.069; M0.176; S0.055; _0.898)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 383 aa (-cTP 359)
Molecular Weight 42.80 kDA(-cTP )
PI 4.71(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help