PPDB

 The Plant Proteome Database

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AT1G06190.1   Rho termination factor
Lab Annot. RHON1 - RNAseE interactor
Mapman: 27.2 RNA.transcription
Curated Location plastid nucleoid (Pubmed: 23198870 22735703 ) (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G06190.5 11Arabidopsis thaliana03861001000 (0)S
AT1G06190.4 11Arabidopsis thaliana02991001000 (0)C
AT1G06190.3 11Arabidopsis thaliana02991001000 (0)C
Os03g08480.1 7Oryza sativa1E-4638537527 (7)C
Os03g08480.2 7Oryza sativa1E-4638537527 (7)C
v1_GRMZM2G168335_P01 4a53Zea mays4E-46360385385 (85)C
GRMZM2G168335_P01 3.21Zea mays4E-463603853142 (117)C
Zm00001eb258380_P001 agpv5Zea mays7E-4536039530 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: NPIP(1) Rho_N(1) SAP(2)
TargetP: Chloroplast (Class 5 C0.497; M0.070; S0.006; _0.399)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 401 aa (-cTP 338)
Molecular Weight 44.53 kDA(-cTP 37.56)
PI 5.06(-cTP 4.78)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
640Detail       leaf [A. thaliana] plastid nucleoid wild-type
1176Detail       leaf [A. thaliana] co-IP ClpR2 stromawild-type
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1179Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1197Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1261Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 1) thylakoid membraneshoot1 (null mutant)
1263Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 2) thylakoid membraneshoot1 (null mutant)
1292Detail       leaf [A. thaliana] co-IP cGEP (rep. 1) stromawild-type
1294Detail       leaf [A. thaliana] co-IP cGEP (rep. 2) stromawild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1566Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1567Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1569Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1583Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1633Detail       leaf [A. thaliana] Stroma stromawild-type
1634Detail       leaf [A. thaliana] Stroma stromawild-type
1635Detail       leaf [A. thaliana] Stroma stromaclpt1-2
1636Detail       leaf [A. thaliana] Stroma stromaclpt1-2
2246Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
20733066(ABA effected phosphoproteome)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

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