PPDB

The Plant Proteome Database

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AT1G06060.1   LisH and RanBPM domains containing protein

Lab Annot. LisH and RanBPM domains containing protein
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G06060.2 11Arabidopsis thaliana5E-1491991001000 (0)_
AT1G35470.2 11Arabidopsis thaliana7E-1621927492 (0)_
AT1G61150.5 11Arabidopsis thaliana3E-1516030507 (0)_
Os01g56820.1 7Oryza sativa4E-9620862806 (6)_
Os01g56820.2 7Oryza sativa1E-8919961796 (6)_
Os03g13220.1 7Oryza sativa6E-1720127474 (4)_
Zm00001eb369980_P001 agpv5Zea mays6E-9020859770 (0)_
GRMZM2G085602_P03 3.21Zea mays6E-9020859776 (0)_
Zm00001eb369980_P003 agpv5Zea mays3E-8319958760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CLTH(1) LisH(2) Ribosomal_L36e(1)
TargetP: Cytoplasm (Class 2 C0.062; M0.039; S0.244; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 213 aa (-cTP 202)
Molecular Weight 24.56 kDA(-cTP )
PI 5.77(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


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