PPDB

PPDB	The Plant Proteome Database

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AT1G06040.1 B-box zinc finger family protein

Lab Annot.

B-box zinc finger protein
Mapman: 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G06040.2 11 Arabidopsis thaliana 5E-121 168 100 100 0 (0) _
AT2G31380.1 11 Arabidopsis thaliana 1E-118 250 69 82 0 (0) S
AT1G78600.1 11 Arabidopsis thaliana 3E-44 108 64 77 0 (0) S
Os04g41560.2 7 Oryza sativa 1E-66 261 51 62 0 (0) S
Os02g39360.1 7 Oryza sativa 2E-64 274 47 58 0 (0) S
Os04g41560.4 7 Oryza sativa 1E-51 179 55 66 0 (0) S
Zm00001eb246600_P002 agpv5 Zea mays 2E-77 261 51 62 0 (0) S
Zm00001eb184110_P001 agpv5 Zea mays 2E-75 257 50 61 0 (0) S
GRMZM2G019335_P01 3.21 Zea mays 2E-75 257 50 61 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CEBP_ZZ(2) DUF2318(2) DUF4428(2) PHD(2) zf-B_box(2) zf-SNAP50_C(2)
TargetP:	Cytoplasm (Class 5 C0.026; M0.011; S0.437; _0.615)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	248 aa (-cTP 192)
Molecular Weight	27.64 kDA(-cTP )
PI	5.42(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data