PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G05970.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G05970.2 11Arabidopsis thaliana3E-14520099990 (0)_
Os07g15270.1 7Oryza sativa4E-4418740640 (0)M
Os09g02400.4 7Oryza sativa3E-4218637630 (0)_
Os09g02400.1 7Oryza sativa3E-4218637630 (0)_
v1_GRMZM2G390876_P01 4a53Zea mays2E-5018742640 (0)C
GRMZM2G390876_P01 3.21Zea mays2E-5018742640 (0)C
Zm00001eb304590_P001 agpv5Zea mays2E-5018742640 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1)
TargetP: Cytoplasm (Class 3 C0.037; M0.367; S0.030; _0.778)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 198 aa (-cTP 134)
Molecular Weight 22.65 kDA(-cTP )
PI 9.52(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help