PPDB

 The Plant Proteome Database

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AT1G05910.1   cell division cycle protein 48-related / CDC48-like protein
Lab Annot. cell division cycle protein 48 (CDC48)
Mapman: 31.2 cell.division
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15120.1 11Arabidopsis thaliana6E-7831547662 (2)_
AT3G15120.2 11Arabidopsis thaliana8E-7831547660 (0)_
AT3G09840.1 11Arabidopsis thaliana3E-644033855559 (352)_
Os09g33980.1 7Oryza sativa0121961754 (4)_
Os03g05730.1 7Oryza sativa1E-63403375551 (51)_
Os10g30580.1 7Oryza sativa2E-63403375579 (79)_
GRMZM2G040079_P01 3.21Zea mays0121861751 (1)_
Zm00001eb318390_P001 agpv5Zea mays0121861750 (0)_
v1_GRMZM2G040079_P01 4a53Zea mays01218617512 (12)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(2) AAA_14(1) AAA_16(1) AAA_18(1) AAA_2(1) AAA_22(1) AAA_25(1) AAA_30(1) AAA_
TargetP: Cytoplasm (Class 4 C0.293; M0.178; S0.005; _0.520)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1210 aa (-cTP 1155)
Molecular Weight 133.78 kDA(-cTP )
PI 5.59(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1415Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.1 clpr2-1
1416Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.2 clpr2-1
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1455Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1456Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1483Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1542Detail       leaf [A. thaliana] wild-type
1751Detail        [A. thaliana] Col-0

* For details about the exprimental sources click here.

Published Proteomics Data

 19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data

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