PPDB

The Plant Proteome Database

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AT1G05900.1   endonuclease III 2

Lab Annot. DNA glycosylase-lyase/endonuclease NTH2- maybe involved in base excision repair
Mapman: 28.2 DNA.repair
Curated Location plastid nucleoid (Pubmed: 23198870 19372224 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G05900.2 11Arabidopsis thaliana03111001000 (0)C
AT2G31450.1 11Arabidopsis thaliana6E-13831562790 (0)M
AT2G31450.2 11Arabidopsis thaliana2E-13531562780 (0)C
Os11g16580.1 7Oryza sativa8E-7926349650 (0)C
Zm00001eb406830_P004 agpv5Zea mays1E-8230146630 (0)C
Zm00001eb406830_P003 agpv5Zea mays2E-8230146630 (0)C
Zm00001eb406830_P001 agpv5Zea mays3E-8230246630 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HHH(1) HhH-GPD(1) HHH_5(2) MA3(2) MtrA(1)
TargetP: Chloroplast (Class 3 C0.726; M0.254; S0.020; _0.008)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 314 aa (-cTP 264)
Molecular Weight 34.49 kDA(-cTP 29.19)
PI 9.32(-cTP 9.20)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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