PPDB

PPDB	The Plant Proteome Database

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AT1G05890.2 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

PeptideAtlas POGS Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G05890.1 11 Arabidopsis thaliana 0 594 92 92 2 (0) _
AT2G31510.1 11 Arabidopsis thaliana 0 605 71 79 0 (0) _
AT2G31510.3 11 Arabidopsis thaliana 0 490 78 86 0 (0) _
Os04g41470.1 7 Oryza sativa 0 559 64 76 0 (0) _
Os08g42740.2 7 Oryza sativa 0 506 63 74 0 (0) _
Os08g42740.3 7 Oryza sativa 0 506 63 74 0 (0) _
Zm00001eb425570_P001 agpv5 Zea mays 0 588 61 73 0 (0) _
Zm00001eb425570_P003 agpv5 Zea mays 0 538 64 76 0 (0) _
GRMZM2G006428_P02 3.21 Zea mays 0 497 63 75 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IBR(4) zf-C3HC4(3) zf-C3HC4_2(4) zf-C3HC4_3(3) zf-C3HC4_4(3) zf-RING_2(3) zf-RIN
TargetP:	Cytoplasm (Class 2 C0.010; M0.192; S0.096; _0.971)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:
TAT position:
Length	594 aa (-cTP 541)
Molecular Weight	67.38 kDA(-cTP )
PI	5.20(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data