PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G05890.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G05890.2 11 Arabidopsis thaliana 0 594 92 92 0 (0) _
AT2G31510.1 11 Arabidopsis thaliana 0 563 76 85 0 (0) _
AT2G31510.2 11 Arabidopsis thaliana 0 498 77 86 0 (0) _
Os04g41470.1 7 Oryza sativa 0 517 69 82 0 (0) _
Os08g42740.2 7 Oryza sativa 0 529 61 73 0 (0) _
Os08g42740.3 7 Oryza sativa 0 529 61 73 0 (0) _
Zm00001eb425570_P001 agpv5 Zea mays 0 546 66 79 0 (0) _
Zm00001eb425570_P003 agpv5 Zea mays 0 496 69 82 0 (0) _
GRMZM2G006428_P02 3.21 Zea mays 0 455 69 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IBR(4) zf-C3HC4(3) zf-C3HC4_2(4) zf-C3HC4_3(3) zf-C3HC4_4(3) zf-RING_2(3) zf-RIN
TargetP:	Cytoplasm (Class 1 C0.085; M0.094; S0.116; _0.944)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	552 aa (-cTP 529)
Molecular Weight	62.46 kDA(-cTP )
PI	5.12(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data