PPDB

PPDB	The Plant Proteome Database

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AT1G05880.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G05880.2 11 Arabidopsis thaliana 0 496 98 98 0 (0) _
AT1G05880.3 11 Arabidopsis thaliana 0 464 98 98 0 (0) _
AT2G31510.1 11 Arabidopsis thaliana 9E-120 500 42 57 0 (0) _
Os04g41470.1 7 Oryza sativa 1E-102 513 37 54 0 (0) _
Os08g42740.2 7 Oryza sativa 2E-85 483 36 53 0 (0) _
Os08g42740.3 7 Oryza sativa 2E-85 483 36 53 0 (0) _
Zm00001eb078850_P001 agpv5 Zea mays 1E-102 500 38 54 0 (0) _
GRMZM5G876621_P02 3.21 Zea mays 1E-102 500 38 54 0 (0) _
v1_GRMZM2G032840_P01 4a53 Zea mays 1E-102 500 38 54 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ArfGap(1) DUF3050(2) DUF760(1) IBR(2) zf-C3HC4(3) zf-C3HC4_4(2) zf-RING_2(3) Zn_
TargetP:	Cytoplasm (Class 1 C0.049; M0.087; S0.080; _0.943)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	489 aa (-cTP 399)
Molecular Weight	55.57 kDA(-cTP )
PI	5.19(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data