PPDB

PPDB	The Plant Proteome Database

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AT1G05860.1 INO80 complex subunit D-like protein

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G05860.2 11 Arabidopsis thaliana 0 280 100 100 0 (0) C
AT1G05860.3 11 Arabidopsis thaliana 1E-144 192 100 100 0 (0) C
AT2G31600.5 11 Arabidopsis thaliana 1E-127 302 65 74 0 (0) C
Os05g23840.1 7 Oryza sativa 4E-29 178 35 48 0 (0) _
Os12g12950.1 7 Oryza sativa 4E-23 214 34 45 0 (0) C
Zm00001eb284530_P001 agpv5 Zea mays 2E-32 224 35 48 0 (0) C
Zm00001eb351080_P001 agpv5 Zea mays 4E-30 224 34 49 0 (0) S
GRMZM2G092000_P01 3.21 Zea mays 4E-30 224 34 49 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Glyco_hydro_100(1) Glyco_trans_4_2(1) zf-C3Hc3H(1)
TargetP:	Chloroplast (Class 2 C0.813; M0.196; S0.009; _0.098)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	280 aa (-cTP 229)
Molecular Weight	31.18 kDA(-cTP 25.86)
PI	9.62(-cTP 9.50)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data