PPDB

 The Plant Proteome Database

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AT1G05850.1   Chitinase family protein
Lab Annot. Chitinase protein
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G05850.2 11Arabidopsis thaliana03211001000 (0)S
AT3G16920.2 11Arabidopsis thaliana4E-16027972850 (0)_
AT3G16920.1 11Arabidopsis thaliana8E-16027972850 (0)S
Os09g32080.2 7Oryza sativa2E-156317667911 (11)S
Os09g32080.1 7Oryza sativa2E-156317667911 (11)S
Os08g41100.1 7Oryza sativa1E-14927671822 (2)S
GRMZM2G168364_P01 3.21Zea mays1E-15931367811 (1)S
v1_GRMZM2G168364_P01 4a53Zea mays1E-15931367811 (1)S
Zm00001eb317090_P001 agpv5Zea mays1E-15931367810 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_19(1)
TargetP: Secreted (Class 1 C0.006; M0.022; S0.985; _0.096)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 321 aa (-cTP 227)
Molecular Weight 35.58 kDA(-cTP )
PI 7.49(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help