PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G05810.1   Rab GTPase-like A5A protein
Lab Annot. RAB GTPase homolog A5E
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G05810.2 11Arabidopsis thaliana6E-1612181001000 (0)C
AT2G31680.1 11Arabidopsis thaliana5E-14221989943 (3)_
AT2G43130.1 11Arabidopsis thaliana7E-13221683926 (6)_
Os08g41340.1 7Oryza sativa7E-120216768711 (11)_
Os07g44040.1 7Oryza sativa5E-9421763770 (0)_
Os05g48980.1 7Oryza sativa3E-83212607422 (22)_
Zm00001eb036050_P001 agpv5Zea mays5E-12021676870 (0)_
AC197246.3_FGP001 3.21Zea mays5E-12021676874 (4)_
v1_AC197246.3_FGP001 4a53Zea mays5E-12021676872 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_16(1) Arf(1) GTP_EFTU(1) MMR_HSR1(1) Ras(1) Roc(1) TniB(1)
TargetP: Cytoplasm (Class 2 C0.072; M0.150; S0.202; _0.858)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 218 aa (-cTP 180)
Molecular Weight 24.21 kDA(-cTP )
PI 4.89(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help