PPDB

PPDB	The Plant Proteome Database

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AT1G05750.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

CLB19 -PPR protein - editing rpoA, ClpP (PDE247)
Mapman: 27.1.5* RNA.processing.editing

Curated Location

plastid (Pubmed: 23198870 18657233 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G05750.2 11 Arabidopsis thaliana 0 500 100 100 0 (0) C
AT2G20540.1 11 Arabidopsis thaliana 7E-122 454 39 62 0 (0) _
AT2G20540.2 11 Arabidopsis thaliana 9E-121 455 39 62 0 (0) _
Os02g53050.1 7 Oryza sativa 1E-149 448 49 68 0 (0) _
Os07g02280.1 7 Oryza sativa 1E-112 463 41 60 0 (0) C
Os10g26070.1 7 Oryza sativa 1E-109 458 38 60 0 (0) M
Zm00001eb193500_P004 agpv5 Zea mays 8E-155 484 46 65 0 (0) C
v1_GRMZM2G158839_P01 4a53 Zea mays 8E-155 484 46 65 0 (0) C
GRMZM2G158839_P01 3.21 Zea mays 8E-155 484 46 65 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ESCRT-II(2) PPR(9) PPR_1(10) PPR_2(10) PPR_3(8) PPR_long(4) TPR_14(3) TPR_16(3)
TargetP:	Chloroplast (Class 2 C0.758; M0.151; S0.013; _0.154)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	500 aa (-cTP 446)
Molecular Weight	55.78 kDA(-cTP 49.84)
PI	8.59(-cTP 7.97)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data