PPDB

The Plant Proteome Database

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AT1G05620.1   uridine-ribohydrolase 2

Lab Annot. inosine-uridine preferring nucleoside hydrolase protein
Mapman: 23.2 nucleotide metabolism.degradation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G05620.2 11Arabidopsis thaliana03021001002 (2)_
AT2G36310.1 11Arabidopsis thaliana1E-11231952700 (0)_
Os03g31170.1 7Oryza sativa5E-171314728423 (23)_
Os03g31170.2 7Oryza sativa3E-130238738620 (20)_
Os03g31170.3 7Oryza sativa1E-129240738520 (20)_
Zm00001eb333950_P002 agpv5Zea mays2E-16931571830 (0)_
GRMZM2G029845_P01 3.21Zea mays2E-169315718321 (21)_
v1_GRMZM2G029845_P01 4a53Zea mays2E-169315718319 (19)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BAP(1) IU_nuc_hydro(1)
TargetP: Cytoplasm (Class 2 C0.058; M0.075; S0.150; _0.918)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 322 aa (-cTP 297)
Molecular Weight 34.67 kDA(-cTP )
PI 5.02(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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