PPDB

PPDB	The Plant Proteome Database

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AT1G05600.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G05600.3 11 Arabidopsis thaliana 0 504 100 100 0 (0) M
AT1G05600.2 11 Arabidopsis thaliana 0 504 100 100 0 (0) M
AT5G46100.1 11 Arabidopsis thaliana 2E-49 456 26 51 0 (0) _
Os06g05920.1 7 Oryza sativa 1E-41 400 25 49 0 (0) C
Os05g04160.1 7 Oryza sativa 9E-41 525 23 42 0 (0) M
Os07g14530.3 7 Oryza sativa 9E-39 501 26 45 0 (0) C
GRMZM2G170941_P01 3.21 Zea mays 2E-103 492 37 57 0 (0) M
v1_GRMZM2G170941_P01 4a53 Zea mays 2E-103 492 37 57 0 (0) M
Zm00001eb364960_P001 agpv5 Zea mays 2E-103 492 37 57 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	NRDE-2(1) PPR(11) PPR_1(9) PPR_2(10) PPR_3(6) PPR_long(4) TPR_1(1) TPR_12(3) TPR
TargetP:	Mitochondria (Class 2 C0.049; M0.754; S0.059; _0.121)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	504 aa (-cTP 477)
Molecular Weight	57.27 kDA(-cTP )
PI	5.89(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data