PPDB

The Plant Proteome Database

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AT1G05510.1   naphthalene 1%2C2-dioxygenase subunit alpha (DUF1264)

Lab Annot. Protein is tyrosine-phosphorylated
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G31985.1 11Arabidopsis thaliana1E-15824184930 (0)_
AT5G45690.1 11Arabidopsis thaliana2E-55231366124 (21)_
AT4G18920.1 11Arabidopsis thaliana3E-5523836620 (0)_
Os05g49440.2 7Oryza sativa2E-12323070820 (0)_
Os05g49440.1 7Oryza sativa2E-9518070830 (0)_
Os01g52830.1 7Oryza sativa3E-5522338620 (0)C
Zm00001eb187280_P002 agpv5Zea mays4E-11722367820 (0)_
GRMZM2G044627_P01 3.21Zea mays4E-11722367820 (0)_
v1_GRMZM2G044627_P01 4a53Zea mays4E-11722367820 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1264(1)
TargetP: Cytoplasm (Class 2 C0.246; M0.155; S0.033; _0.860)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 241 aa (-cTP 214)
Molecular Weight 27.29 kDA(-cTP )
PI 6.22(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2274Detail       seedlings [A. thaliana] total tissue wild-type
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
15908592(Carbonylated seed protein)
17293592(total seedlings û light and dark grown)
18599647(seed proteome)
20118269(developing seeds)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help