PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G05440.1   C-8 sterol isomerase

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g53580.1 7Oryza sativa4E-2629430480 (0)C
Zm00001eb057090_P001 agpv5Zea mays1E-4033329470 (0)C
v1_GRMZM2G171248_P01 4a53Zea mays1E-4033329470 (0)C
GRMZM2G171248_P01 3.21Zea mays1E-4033329470 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ERG2_Sigma1R(1)
TargetP: Cytoplasm (Class 4 C0.335; M0.125; S0.024; _0.638)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 393 aa (-cTP 350)
Molecular Weight 44.49 kDA(-cTP )
PI 8.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help