PPDB

PPDB	The Plant Proteome Database

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AT1G05350.1 NAD(P)-binding Rossmann-fold superfamily protein

Lab Annot.

thiF protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G21470.1 11 Arabidopsis thaliana 2E-12 168 27 45 4 (0) S
AT2G21470.3 11 Arabidopsis thaliana 2E-12 168 27 45 3 (0) S
AT2G21470.2 11 Arabidopsis thaliana 3E-12 168 27 45 4 (0) S
Os02g30310.1 7 Oryza sativa 0 428 73 85 1 (1) _
Os02g30310.2 7 Oryza sativa 0 428 71 82 1 (1) _
Os02g30310.3 7 Oryza sativa 0 370 77 85 1 (1) _
Zm00001eb241690_P001 agpv5 Zea mays 0 430 72 84 0 (0) _
GRMZM2G360589_P01 3.21 Zea mays 0 430 72 84 37 (2) _
Zm00001eb241690_P002 agpv5 Zea mays 0 386 77 88 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	2-Hacid_dh_C(1) FAD_binding_3(1) NAD_binding_7(1) Sacchrp_dh_NADP(3) ThiF(1)
TargetP:	Cytoplasm (Class 5 C0.433; M0.046; S0.079; _0.533)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	431 aa (-cTP 367)
Molecular Weight	47.02 kDA(-cTP )
PI	4.58(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data