PPDB

The Plant Proteome Database

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AT1G05310.1   Pectin lyase-like superfamily protein

Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G36710.1 11Arabidopsis thaliana9E-11530752710 (0)S
AT2G36700.1 11Arabidopsis thaliana7E-10830149680 (0)_
AT5G19730.1 11Arabidopsis thaliana7E-9729747670 (0)S
Os08g10604.1 7Oryza sativa3E-16132265810 (0)S
Os09g39760.1 7Oryza sativa2E-10733747650 (0)M
Os05g44600.1 7Oryza sativa4E-9831047660 (0)S
Zm00001eb413800_P001 agpv5Zea mays3E-17133664810 (0)S
GRMZM2G455564_P01 3.21Zea mays8E-17133664810 (0)_
v1_GRMZM2G455564_P01 4a53Zea mays8E-17133664810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pectinesterase(1) SelP_N(1)
TargetP: Secreted (Class 2 C0.139; M0.014; S0.906; _0.075)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 393 aa (-cTP 364)
Molecular Weight 43.35 kDA(-cTP )
PI 8.22(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help