PPDB

PPDB	The Plant Proteome Database

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AT1G05150.1 Calcium-binding tetratricopeptide family protein

Lab Annot.

calcium-binding EF hand protein
Mapman: 30.3 signalling.calcium

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G32450.1 11 Arabidopsis thaliana 0 809 89 94 9 (9) _
AT3G04240.1 11 Arabidopsis thaliana 2E-13 267 23 40 0 (0) C
AT3G04240.2 11 Arabidopsis thaliana 1E-09 168 27 46 0 (0) _
Os03g15740.1 7 Oryza sativa 0 829 63 77 30 (30) _
Os01g68680.1 7 Oryza sativa 2E-10 244 25 41 0 (0) M
Os08g44510.1 7 Oryza sativa 7E-09 252 24 42 2 (2) _
Zm00001eb398060_P002 agpv5 Zea mays 0 830 64 78 0 (0) _
GRMZM2G438722_P02 3.21 Zea mays 0 830 64 78 2 (2) _
GRMZM2G438722_P04 3.21 Zea mays 0 830 64 78 2 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	4HB_MCP_1(1) Alkyl_sulf_dimr(2) ANAPC3(5) ANAPC5(3) BTAD(2) EF-hand_1(2) EF-hand
TargetP:	Cytoplasm (Class 5 C0.045; M0.564; S0.042; _0.655)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	808 aa (-cTP 801)
Molecular Weight	90.17 kDA(-cTP )
PI	6.31(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1494	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
18463617(suspension cells-phosphorylated proteins)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19106119(plasma membrane detergent resistent microdomains (DRM))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data