PPDB

PPDB	The Plant Proteome Database

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AT1G05120.1 Helicase protein with RING/U-box domain-containing protein

Lab Annot.

Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G05120.2 11 Arabidopsis thaliana 0 833 100 100 0 (0) _
AT1G02670.6 11 Arabidopsis thaliana 0 490 67 75 0 (0) _
AT1G02670.3 11 Arabidopsis thaliana 0 490 67 75 0 (0) _
Os07g32730.1 7 Oryza sativa 1E-175 372 66 80 0 (0) M
Os02g32570.2 7 Oryza sativa 3E-90 527 34 51 0 (0) _
Os02g32570.1 7 Oryza sativa 3E-88 527 34 51 0 (0) _
Zm00001eb322510_P001 agpv5 Zea mays 0 759 59 74 0 (0) _
GRMZM2G021233_P02 3.21 Zea mays 0 687 61 75 0 (0) C
Zm00001eb322510_P002 agpv5 Zea mays 0 687 61 75 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(2) DUF5523(2) Helicase_C(1) HypA(3) Prok-RING_4(1) ResIII(1) SNF2_N(2) YABB
TargetP:	Cytoplasm (Class 3 C0.047; M0.340; S0.077; _0.822)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	833 aa (-cTP 822)
Molecular Weight	94.59 kDA(-cTP )
PI	8.36(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19888209(80S polysomal fraction)

Comparative Proteomics Data